Ancestrify
All stories
By Andi Thomaj
3 min read

qpAdm data preparation: from a raw DNA file to an AADR merge that works

The undocumented half of every qpAdm analysis: file formats, genome builds, strand hygiene, convertf and Poseidon, and the merge arithmetic that decides your standard errors before any model runs.

qpadmguideraw-dnamethodology

  1. The target state, and the formats on the way
  2. The three silent killers
  3. The merge itself, and the arithmetic to expect
  4. Or skip it, knowingly
  5. References

Related posts

Learn qpAdm: the complete guide, from zero to defensible models
Learn qpAdm: the complete guide, from zero to defensible models

A structured learning path through everything qpAdm — what to read in what order, from the f4-statistics underneath to running models in R, choosing outgroups, reading results and knowing the method's measured limits.

3 min read
qpAdm best practices: the current checklist, with the numbers behind every rule
qpAdm best practices: the current checklist, with the numbers behind every rule

The definitive working checklist for qpAdm in 2026 — temporal stratification, right-set construction, lowest-rank-first search, composite feasibility and reporting standards — each rule carrying its measured justification from the 2021–2025 audit literature.

4 min read
Classic ADMIXTOOLS vs ADMIXTOOLS 2: why your qpAdm numbers differ, and how to match them
Classic ADMIXTOOLS vs ADMIXTOOLS 2: why your qpAdm numbers differ, and how to match them

Same model, different p-value: the real differences between original qpAdm and ADMIXTOOLS 2 — allsnps semantics, fudge_twice, f2 precomputation — and the settings that reproduce classic behaviour when you need to.

3 min read
Back to all stories
Ancestrify

Combining cutting-edge genomic science with rich historical records to map your ancestry across generations and continents.

Product
DashboardAncient OriginsYour ancestryPopulationsqpAdm analysisBuy qpAdmqpAdm Model LabGlobal25 analysisGet G25 coordinatesHow to get G25 coordinatesAncient MatchesRelative FinderNotable MatchesAncestry populationsAncient DNA testComparePricingFree toolsLive demoLeaderboardArticlesFAQAbout
Legal
Terms of ServicePrivacy NoticeRefund PolicyEditorial policyLegal noticeCredits
Connect
Contact UsSupportCommunity GroupFacebookInstagram
Card payments processed by POK Payments (RPay Ltd)
VISAMASTERCARD

© 2026 Ancestrify. All rights reserved.

Ancestrify is a trading name of Andi Thomaj, a sole trader registered in Tiranë, Albania · NUIS M61725001N